000 01718nam a22001817a 4500
082 _a570.285
_bS617S
100 _aSingh, Nishtha
_945479
245 _aSingle Cell RNA Sequencing Analysis on Covid-19 Data
_cby Nishtha Singh
260 _aIIT Jodhpur
_bDepartment of Bioscience and Bioengineering
_c2023
300 _a34p.
_bHB
500 _aSingle-cell RNA sequencing (scRNA-seq) is the sequencing of each cell's transcriptome to obtain gene expression patterns at a cellular resolution. Analysis of transcriptomes at the cellular level provides insights into the complex microenvironment of biological tissue. Unknown and rare cell types can be identified by scRNA-seq analysis. Single-cell RNA sequencing provides gene expression of each cell, which helps in differentiating between different cell types. In this research work, the R software platform is used to analyze single-cell RNA sequencing dataset of COVID-19 with the help of certain software. Analysis provides information about the transcriptome. This research work focuses on analyzing single-cell RNA-seq data of PBMCs from COVID-19 patients on R platform. The dataset for the project work was taken from Gene Expression Omnibus - NCBI. The analysis includes several steps like pre-processing of the data, quality control, data correction, normalization, scaling, feature selection, dimensional reduction (PCA), clustering, marker identification, and cluster annotation.
650 _aDepartment of Bioscience and Bioengineering
_945480
650 _aSingle-cell RNA Sequencing (scRNA-seq)
_945481
650 _aPBMCs (Peripheral Blood Mononuclear Cells)
_945482
650 _aMTech Theses
_945483
700 _aYadav, Pankaj
_945484
942 _cTH
999 _c16594
_d16594